Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.51■□□□□ 0.87
VTNP04004 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
VTNP04004 AL162741.1-201ENST00000565563 1558 ntBASIC20.51■□□□□ 0.87
VTNP04004 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VTNP04004 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.5■□□□□ 0.87
VTNP04004 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.5■□□□□ 0.87
VTNP04004 AC005332.7-201ENST00000614046 2005 ntBASIC20.5■□□□□ 0.87
VTNP04004 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.5■□□□□ 0.87
VTNP04004 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.5■□□□□ 0.87
VTNP04004 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.5■□□□□ 0.87
VTNP04004 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.5■□□□□ 0.87
VTNP04004 AC011498.5-201ENST00000592027 486 ntBASIC20.5■□□□□ 0.87
VTNP04004 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.5■□□□□ 0.87
VTNP04004 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
VTNP04004 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
VTNP04004 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VTNP04004 AC116562.4-201ENST00000641316 2276 ntBASIC20.5■□□□□ 0.87
VTNP04004 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.5■□□□□ 0.87
VTNP04004 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.49■□□□□ 0.87
VTNP04004 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.49■□□□□ 0.87
VTNP04004 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
VTNP04004 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.49■□□□□ 0.87
VTNP04004 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.49■□□□□ 0.87
VTNP04004 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
VTNP04004 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.49■□□□□ 0.87
VTNP04004 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VTNP04004 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VTNP04004 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.48■□□□□ 0.87
VTNP04004 AL357033.4-201ENST00000617703 1807 ntBASIC20.48■□□□□ 0.87
VTNP04004 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 HEIH-201ENST00000623091 1652 ntBASIC20.48■□□□□ 0.87
VTNP04004 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
VTNP04004 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.48■□□□□ 0.87
VTNP04004 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
VTNP04004 KRT18P48-201ENST00000434763 852 ntBASIC20.48■□□□□ 0.87
VTNP04004 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.48■□□□□ 0.87
VTNP04004 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.48■□□□□ 0.87
VTNP04004 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.48■□□□□ 0.87
VTNP04004 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.48■□□□□ 0.87
VTNP04004 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.48■□□□□ 0.87
VTNP04004 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.48■□□□□ 0.87
VTNP04004 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VTNP04004 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTNP04004 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
VTNP04004 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
VTNP04004 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VTNP04004 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.47■□□□□ 0.87
VTNP04004 Z98044.1-201ENST00000632503 1764 ntBASIC20.47■□□□□ 0.87
VTNP04004 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.47■□□□□ 0.87
VTNP04004 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTNP04004 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTNP04004 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.47■□□□□ 0.87
VTNP04004 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.47■□□□□ 0.87
VTNP04004 ATP5G2P1-201ENST00000433580 426 ntBASIC20.47■□□□□ 0.87
VTNP04004 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VTNP04004 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.47■□□□□ 0.87
VTNP04004 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms