Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX4O95219 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX4O95219 CROCCP3-202ENST00000420820 1947 ntBASIC17.6■□□□□ 0.41
SNX4O95219 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX4O95219 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX4O95219 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX4O95219 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SNX4O95219 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SNX4O95219 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX4O95219 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX4O95219 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SNX4O95219 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 FAM207BP-201ENST00000447172 505 ntBASIC17.59■□□□□ 0.41
SNX4O95219 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.59■□□□□ 0.41
SNX4O95219 AP000525.1-201ENST00000608286 694 ntBASIC17.59■□□□□ 0.41
SNX4O95219 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX4O95219 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX4O95219 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX4O95219 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX4O95219 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
SNX4O95219 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX4O95219 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SNX4O95219 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX4O95219 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.58■□□□□ 0.41
SNX4O95219 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
SNX4O95219 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.58■□□□□ 0.41
SNX4O95219 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX4O95219 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX4O95219 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SNX4O95219 MIR1238-201ENST00000408483 83 ntBASIC17.58■□□□□ 0.4
SNX4O95219 AC091390.4-202ENST00000476426 537 ntBASIC17.58■□□□□ 0.4
SNX4O95219 AC097488.1-201ENST00000507834 756 ntBASIC17.58■□□□□ 0.4
SNX4O95219 AP005242.2-201ENST00000580065 1175 ntBASIC17.58■□□□□ 0.4
SNX4O95219 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX4O95219 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SNX4O95219 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SNX4O95219 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX4O95219 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 AC104417.2-201ENST00000562989 1793 ntBASIC17.58■□□□□ 0.4
SNX4O95219 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SNX4O95219 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX4O95219 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX4O95219 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNX4O95219 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 FZD10-202ENST00000539839 3282 ntBASIC17.57■□□□□ 0.4
SNX4O95219 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNX4O95219 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SNX4O95219 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.57■□□□□ 0.4
SNX4O95219 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms