Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS3O75489 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.68■□□□□ 0.58
NDUFS3O75489 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS3O75489 WIZP1-201ENST00000531444 2299 ntBASIC18.68■□□□□ 0.58
NDUFS3O75489 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.68■□□□□ 0.58
NDUFS3O75489 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NDUFS3O75489 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
NDUFS3O75489 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDUFS3O75489 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
NDUFS3O75489 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 RNF165-205ENST00000588679 2904 ntBASIC18.67■□□□□ 0.58
NDUFS3O75489 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.67■□□□□ 0.58
NDUFS3O75489 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.67■□□□□ 0.58
NDUFS3O75489 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.67■□□□□ 0.58
NDUFS3O75489 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NDUFS3O75489 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NDUFS3O75489 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 UNC93B2-201ENST00000285383 730 ntBASIC18.67■□□□□ 0.58
NDUFS3O75489 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NDUFS3O75489 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.67■□□□□ 0.58
NDUFS3O75489 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.67■□□□□ 0.58
NDUFS3O75489 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.67■□□□□ 0.58
NDUFS3O75489 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.67■□□□□ 0.58
NDUFS3O75489 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDUFS3O75489 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.67■□□□□ 0.58
NDUFS3O75489 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
NDUFS3O75489 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.66■□□□□ 0.58
NDUFS3O75489 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.66■□□□□ 0.58
NDUFS3O75489 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.66■□□□□ 0.58
NDUFS3O75489 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NDUFS3O75489 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NDUFS3O75489 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 RCC2P3-201ENST00000418112 1537 ntBASIC18.66■□□□□ 0.58
NDUFS3O75489 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
NDUFS3O75489 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.66■□□□□ 0.58
NDUFS3O75489 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.66■□□□□ 0.58
NDUFS3O75489 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.66■□□□□ 0.58
NDUFS3O75489 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.66■□□□□ 0.58
NDUFS3O75489 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NDUFS3O75489 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.66■□□□□ 0.58
NDUFS3O75489 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
NDUFS3O75489 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.66■□□□□ 0.58
NDUFS3O75489 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDUFS3O75489 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.65■□□□□ 0.58
NDUFS3O75489 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NDUFS3O75489 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.65■□□□□ 0.58
NDUFS3O75489 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NDUFS3O75489 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.65■□□□□ 0.58
NDUFS3O75489 SNORA78-201ENST00000459373 127 ntBASIC18.65■□□□□ 0.58
NDUFS3O75489 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.65■□□□□ 0.58
NDUFS3O75489 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.65■□□□□ 0.58
NDUFS3O75489 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
NDUFS3O75489 KRT17P2-201ENST00000300992 1314 ntBASIC18.65■□□□□ 0.58
NDUFS3O75489 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.65■□□□□ 0.58
NDUFS3O75489 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NDUFS3O75489 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.65■□□□□ 0.58
NDUFS3O75489 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.64■□□□□ 0.58
NDUFS3O75489 MTMR9LP-203ENST00000426597 1545 ntBASIC18.64■□□□□ 0.58
NDUFS3O75489 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NDUFS3O75489 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
NDUFS3O75489 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms