Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SGCEO43556 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SGCEO43556 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SGCEO43556 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SGCEO43556 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SGCEO43556 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 MESTP1-201ENST00000404287 994 ntBASIC16.55■□□□□ 0.24
SGCEO43556 AL355355.2-201ENST00000442321 338 ntBASIC16.55■□□□□ 0.24
SGCEO43556 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
SGCEO43556 AC116562.2-201ENST00000507042 360 ntBASIC16.55■□□□□ 0.24
SGCEO43556 AC008550.1-201ENST00000511500 884 ntBASIC16.55■□□□□ 0.24
SGCEO43556 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.55■□□□□ 0.24
SGCEO43556 CKBP1-201ENST00000565489 1086 ntBASIC16.55■□□□□ 0.24
SGCEO43556 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 Z99916.2-201ENST00000604037 246 ntBASIC16.55■□□□□ 0.24
SGCEO43556 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 AC083906.6-201ENST00000641366 219 ntBASIC16.55■□□□□ 0.24
SGCEO43556 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SGCEO43556 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SGCEO43556 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SGCEO43556 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SGCEO43556 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SGCEO43556 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SGCEO43556 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.54■□□□□ 0.24
SGCEO43556 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.54■□□□□ 0.24
SGCEO43556 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 AP000692.2-201ENST00000608391 879 ntBASIC16.54■□□□□ 0.24
SGCEO43556 DGCR10-201ENST00000609839 495 ntBASIC16.54■□□□□ 0.24
SGCEO43556 AP006294.2-201ENST00000641667 209 ntBASIC16.54■□□□□ 0.24
SGCEO43556 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.54■□□□□ 0.24
SGCEO43556 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SGCEO43556 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SGCEO43556 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.53■□□□□ 0.24
SGCEO43556 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SGCEO43556 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.53■□□□□ 0.24
SGCEO43556 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.53■□□□□ 0.24
SGCEO43556 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SGCEO43556 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms