Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF1O15321 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.62■□□□□ 0.57
TM9SF1O15321 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF1O15321 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF1O15321 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.62■□□□□ 0.57
TM9SF1O15321 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF1O15321 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.62■□□□□ 0.57
TM9SF1O15321 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.62■□□□□ 0.57
TM9SF1O15321 HLA-A-209ENST00000638375 975 ntBASIC18.62■□□□□ 0.57
TM9SF1O15321 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF1O15321 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TM9SF1O15321 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF1O15321 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF1O15321 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.62■□□□□ 0.57
TM9SF1O15321 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.62■□□□□ 0.57
TM9SF1O15321 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TM9SF1O15321 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TM9SF1O15321 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF1O15321 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF1O15321 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TM9SF1O15321 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF1O15321 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF1O15321 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF1O15321 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF1O15321 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 KRT8P32-201ENST00000512863 1461 ntBASIC18.61■□□□□ 0.57
TM9SF1O15321 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF1O15321 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.61■□□□□ 0.57
TM9SF1O15321 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
TM9SF1O15321 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.61■□□□□ 0.57
TM9SF1O15321 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF1O15321 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.61■□□□□ 0.57
TM9SF1O15321 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TM9SF1O15321 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TM9SF1O15321 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TM9SF1O15321 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TM9SF1O15321 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
TM9SF1O15321 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.6■□□□□ 0.57
TM9SF1O15321 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TM9SF1O15321 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TM9SF1O15321 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.6■□□□□ 0.57
TM9SF1O15321 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.6■□□□□ 0.57
TM9SF1O15321 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.6■□□□□ 0.57
TM9SF1O15321 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.6■□□□□ 0.57
TM9SF1O15321 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 PNMA6B-201ENST00000538162 1200 ntBASIC18.6■□□□□ 0.57
TM9SF1O15321 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 SIRPAP1-201ENST00000448467 1770 ntBASIC18.6■□□□□ 0.57
TM9SF1O15321 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF1O15321 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 KRT8P41-201ENST00000533985 1514 ntBASIC18.59■□□□□ 0.57
TM9SF1O15321 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TM9SF1O15321 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.59■□□□□ 0.57
TM9SF1O15321 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TM9SF1O15321 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.59■□□□□ 0.57
TM9SF1O15321 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.59■□□□□ 0.57
TM9SF1O15321 AC060766.5-201ENST00000590539 871 ntBASIC18.59■□□□□ 0.57
TM9SF1O15321 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.59■□□□□ 0.57
TM9SF1O15321 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TM9SF1O15321 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TM9SF1O15321 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TM9SF1O15321 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF1O15321 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms