Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SOX1O00570 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SOX1O00570 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.89■□□□□ 0.77
SOX1O00570 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.89■□□□□ 0.77
SOX1O00570 AC009947.1-201ENST00000444350 727 ntBASIC19.89■□□□□ 0.77
SOX1O00570 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.89■□□□□ 0.77
SOX1O00570 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.89■□□□□ 0.77
SOX1O00570 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.89■□□□□ 0.77
SOX1O00570 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.89■□□□□ 0.77
SOX1O00570 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
SOX1O00570 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.89■□□□□ 0.77
SOX1O00570 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.89■□□□□ 0.77
SOX1O00570 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SOX1O00570 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX1O00570 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SOX1O00570 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.88■□□□□ 0.77
SOX1O00570 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 TP73-AS1-210ENST00000637775 1455 ntBASIC19.88■□□□□ 0.77
SOX1O00570 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.88■□□□□ 0.77
SOX1O00570 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.88■□□□□ 0.77
SOX1O00570 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.88■□□□□ 0.77
SOX1O00570 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.88■□□□□ 0.77
SOX1O00570 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.88■□□□□ 0.77
SOX1O00570 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.88■□□□□ 0.77
SOX1O00570 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX1O00570 AC233723.2-201ENST00000623798 2106 ntBASIC19.88■□□□□ 0.77
SOX1O00570 AL162377.1-201ENST00000618844 1793 ntBASIC19.88■□□□□ 0.77
SOX1O00570 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.87■□□□□ 0.77
SOX1O00570 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.87■□□□□ 0.77
SOX1O00570 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SOX1O00570 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.87■□□□□ 0.77
SOX1O00570 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.87■□□□□ 0.77
SOX1O00570 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.87■□□□□ 0.77
SOX1O00570 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.87■□□□□ 0.77
SOX1O00570 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.87■□□□□ 0.77
SOX1O00570 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.87■□□□□ 0.77
SOX1O00570 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.87■□□□□ 0.77
SOX1O00570 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.87■□□□□ 0.77
SOX1O00570 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX1O00570 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SOX1O00570 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 AC063926.2-201ENST00000623766 1308 ntBASIC19.86■□□□□ 0.77
SOX1O00570 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX1O00570 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SOX1O00570 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX1O00570 AC105339.3-201ENST00000560043 636 ntBASIC19.86■□□□□ 0.77
SOX1O00570 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.86■□□□□ 0.77
SOX1O00570 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.86■□□□□ 0.77
SOX1O00570 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.86■□□□□ 0.77
SOX1O00570 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.86■□□□□ 0.77
SOX1O00570 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.86■□□□□ 0.77
SOX1O00570 AC027612.4-201ENST00000605371 583 ntBASIC19.86■□□□□ 0.77
SOX1O00570 AC064836.3-201ENST00000607928 673 ntBASIC19.86■□□□□ 0.77
SOX1O00570 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SOX1O00570 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.86■□□□□ 0.77
SOX1O00570 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.86■□□□□ 0.77
SOX1O00570 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SOX1O00570 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SOX1O00570 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.86■□□□□ 0.77
SOX1O00570 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX1O00570 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms