Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC33A1O00400 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC33A1O00400 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC33A1O00400 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC33A1O00400 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC33A1O00400 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC33A1O00400 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC33A1O00400 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC33A1O00400 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC33A1O00400 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC33A1O00400 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC33A1O00400 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC33A1O00400 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SLC33A1O00400 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC33A1O00400 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC33A1O00400 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SLC33A1O00400 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
SLC33A1O00400 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 AC128676.1-201ENST00000454392 318 ntBASIC16.01■□□□□ 0.15
SLC33A1O00400 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC33A1O00400 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC33A1O00400 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC33A1O00400 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 MIR4651-201ENST00000582622 73 ntBASIC16.01■□□□□ 0.15
SLC33A1O00400 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SLC33A1O00400 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC33A1O00400 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC33A1O00400 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC33A1O00400 AL138781.2-201ENST00000617896 1843 ntBASIC16.01■□□□□ 0.15
SLC33A1O00400 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16■□□□□ 0.15
SLC33A1O00400 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16■□□□□ 0.15
SLC33A1O00400 TSPY23P-201ENST00000440136 739 ntBASIC16■□□□□ 0.15
SLC33A1O00400 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC33A1O00400 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16■□□□□ 0.15
SLC33A1O00400 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16■□□□□ 0.15
SLC33A1O00400 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC33A1O00400 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16■□□□□ 0.15
SLC33A1O00400 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16■□□□□ 0.15
SLC33A1O00400 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC33A1O00400 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC33A1O00400 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 KRT8P41-201ENST00000533985 1514 ntBASIC15.99■□□□□ 0.15
SLC33A1O00400 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC33A1O00400 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC33A1O00400 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC33A1O00400 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms