Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX39AO00148 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX39AO00148 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.05■□□□□ 0.96
DDX39AO00148 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX39AO00148 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX39AO00148 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.05■□□□□ 0.96
DDX39AO00148 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.05■□□□□ 0.96
DDX39AO00148 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
DDX39AO00148 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX39AO00148 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
DDX39AO00148 MYC-208ENST00000641036 567 ntBASIC21.05■□□□□ 0.96
DDX39AO00148 AC068587.9-201ENST00000641814 219 ntBASIC21.05■□□□□ 0.96
DDX39AO00148 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX39AO00148 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
DDX39AO00148 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
DDX39AO00148 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX39AO00148 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX39AO00148 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
DDX39AO00148 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX39AO00148 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
DDX39AO00148 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 AL031133.1-201ENST00000406807 723 ntBASIC21.04■□□□□ 0.96
DDX39AO00148 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 AC112907.2-201ENST00000448639 330 ntBASIC21.04■□□□□ 0.96
DDX39AO00148 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.04■□□□□ 0.96
DDX39AO00148 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX39AO00148 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX39AO00148 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
DDX39AO00148 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX39AO00148 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX39AO00148 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX39AO00148 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX39AO00148 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.04■□□□□ 0.96
DDX39AO00148 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX39AO00148 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX39AO00148 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX39AO00148 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX39AO00148 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX39AO00148 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
DDX39AO00148 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX39AO00148 KRT18P23-201ENST00000435622 1283 ntBASIC21.03■□□□□ 0.96
DDX39AO00148 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 AC112497.1-201ENST00000624824 639 ntBASIC21.03■□□□□ 0.96
DDX39AO00148 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX39AO00148 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX39AO00148 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX39AO00148 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DDX39AO00148 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX39AO00148 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX39AO00148 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX39AO00148 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms