Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 KRT8P7-201ENST00000533003 1432 ntBASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TBC1D3FA6NER0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 MIR564-202ENST00000385049 94 ntBASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 AC079602.3-201ENST00000623931 403 ntBASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 AC007952.6-201ENST00000573168 2673 ntBASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 AC003957.1-201ENST00000625108 2673 ntBASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.63■□□□□ 0.57
TBC1D3FA6NER0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 AL032819.2-201ENST00000624543 2162 ntBASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 KRT126P-201ENST00000549467 1181 ntBASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 AC104390.1-201ENST00000555663 520 ntBASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 AC011498.5-201ENST00000592027 486 ntBASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3FA6NER0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 AL391807.1-203ENST00000604392 2365 ntBASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 HOXB1-202ENST00000577092 1414 ntBASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms