Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.34■□□□□ 0.05
RCL1Q9Y2P8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCL1Q9Y2P8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCL1Q9Y2P8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCL1Q9Y2P8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RCL1Q9Y2P8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RCL1Q9Y2P8 AC009053.2-201ENST00000563701 2365 ntBASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RCL1Q9Y2P8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 DUX4L16-201ENST00000555130 1264 ntBASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RCL1Q9Y2P8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 YBX1P10-201ENST00000444752 975 ntBASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms