Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 AC008894.3-201ENST00000624324 3103 ntBASIC14.64□□□□□ -0.07
RPH3ALQ9UNE2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 DUX4L16-201ENST00000555130 1264 ntBASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 AC010980.2-201ENST00000587099 1412 ntBASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 AL391005.1-201ENST00000623953 2435 ntBASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RPH3ALQ9UNE2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 LSM12P1-201ENST00000411836 588 ntBASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 AL390719.1-204ENST00000412397 1219 ntBASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 TFP1-202ENST00000475455 1573 ntBASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.62□□□□□ -0.07
RPH3ALQ9UNE2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms