Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.41■□□□□ 0.7
SAE1Q9UBE0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 RPS2P55-201ENST00000397318 883 ntBASIC19.4■□□□□ 0.7
SAE1Q9UBE0 AC107956.1-201ENST00000494359 873 ntBASIC19.4■□□□□ 0.7
SAE1Q9UBE0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SAE1Q9UBE0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SAE1Q9UBE0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SAE1Q9UBE0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SAE1Q9UBE0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 UBE2SP1-201ENST00000450587 669 ntBASIC19.39■□□□□ 0.69
SAE1Q9UBE0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.39■□□□□ 0.69
SAE1Q9UBE0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 AL357033.4-201ENST00000617703 1807 ntBASIC19.39■□□□□ 0.69
SAE1Q9UBE0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 BICD1-207ENST00000551848 1962 ntBASIC19.39■□□□□ 0.69
SAE1Q9UBE0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SAE1Q9UBE0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SAE1Q9UBE0 AL135905.2-201ENST00000584934 1404 ntBASIC19.38■□□□□ 0.69
SAE1Q9UBE0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms