Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 AL121829.2-201ENST00000620908 328 ntBASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 HEIH-201ENST00000623091 1652 ntBASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SMARCAL1Q9NZC9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 TSPY21P-201ENST00000433481 731 ntBASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCAL1Q9NZC9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCAL1Q9NZC9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 RCC2P6-201ENST00000526625 1557 ntBASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCAL1Q9NZC9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms