Protein–RNA interactions for Protein: Q9NV58

RNF19A, E3 ubiquitin-protein ligase RNF19A, humanhuman

Predictions only

Length 838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19AQ9NV58 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF19AQ9NV58 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF19AQ9NV58 AC141586.3-201ENST00000562166 1838 ntBASIC20.34■□□□□ 0.85
RNF19AQ9NV58 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF19AQ9NV58 AL512353.2-201ENST00000448759 1962 ntBASIC20.34■□□□□ 0.85
RNF19AQ9NV58 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF19AQ9NV58 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF19AQ9NV58 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF19AQ9NV58 AL157888.1-201ENST00000631930 593 ntBASIC20.33■□□□□ 0.85
RNF19AQ9NV58 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF19AQ9NV58 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF19AQ9NV58 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 HLA-F-220ENST00000434407 884 ntBASIC20.31■□□□□ 0.84
RNF19AQ9NV58 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 MIR3180-1-201ENST00000580374 94 ntBASIC20.31■□□□□ 0.84
RNF19AQ9NV58 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 MIR3180-3-201ENST00000584616 94 ntBASIC20.31■□□□□ 0.84
RNF19AQ9NV58 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 FP475955.4-201ENST00000623131 1990 ntBASIC20.31■□□□□ 0.84
RNF19AQ9NV58 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 AC016734.2-201ENST00000624325 1377 ntBASIC20.31■□□□□ 0.84
RNF19AQ9NV58 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF19AQ9NV58 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.3■□□□□ 0.84
RNF19AQ9NV58 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 AC099343.3-201ENST00000605834 2503 ntBASIC20.3■□□□□ 0.84
RNF19AQ9NV58 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF19AQ9NV58 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms