Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 CR392000.1-201ENST00000624770 1228 ntBASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 MTMR9LP-203ENST00000426597 1545 ntBASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NLRC4Q9NPP4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
NLRC4Q9NPP4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 AC004951.3-201ENST00000418645 1148 ntBASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 PRSS44-201ENST00000515154 1146 ntBASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 AC068587.9-201ENST00000641814 219 ntBASIC20.33■□□□□ 0.85
NLRC4Q9NPP4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRC4Q9NPP4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 AC008040.2-201ENST00000461049 708 ntBASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 KRT16P1-201ENST00000399124 1418 ntBASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRC4Q9NPP4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 AL354751.1-201ENST00000412768 1863 ntBASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 AC011298.2-201ENST00000617989 482 ntBASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRC4Q9NPP4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 KRT8P32-201ENST00000512863 1461 ntBASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLRC4Q9NPP4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms