Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3LQ9H3M9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
ATXN3LQ9H3M9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 HBZP1-201ENST00000354915 429 ntBASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 HCG4P8-203ENST00000443049 980 ntBASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 AC092597.1-201ENST00000487352 616 ntBASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATXN3LQ9H3M9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATXN3LQ9H3M9 AL032819.2-201ENST00000624543 2162 ntBASIC19.64■□□□□ 0.74
ATXN3LQ9H3M9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 KRT18P48-201ENST00000434763 852 ntBASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 TEX21P-204ENST00000641479 1693 ntBASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3LQ9H3M9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms