Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 RPS2P55-201ENST00000397318 883 ntBASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 AL158047.1-201ENST00000445918 881 ntBASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 AC107956.1-201ENST00000494359 873 ntBASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 AC116562.2-201ENST00000507042 360 ntBASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 AL357033.4-201ENST00000617703 1807 ntBASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 RCC2P3-201ENST00000418112 1537 ntBASIC17.37■□□□□ 0.37
SLC38A1Q9H2H9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 NUDT16P1-203ENST00000513809 620 ntBASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 AC096733.2-201ENST00000609937 1394 ntBASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC38A1Q9H2H9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 AC007613.1-201ENST00000572811 2597 ntBASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 AC012618.2-201ENST00000428058 849 ntBASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 AC233702.5-201ENST00000584107 538 ntBASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 AC113410.3-201ENST00000623366 203 ntBASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms