Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS11Q9H270 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
VPS11Q9H270 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS11Q9H270 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS11Q9H270 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS11Q9H270 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VPS11Q9H270 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 POM121L13P-201ENST00000422362 380 ntBASIC18.88■□□□□ 0.61
VPS11Q9H270 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS11Q9H270 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS11Q9H270 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS11Q9H270 AL160286.2-201ENST00000567150 934 ntBASIC18.88■□□□□ 0.61
VPS11Q9H270 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.88■□□□□ 0.61
VPS11Q9H270 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS11Q9H270 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
VPS11Q9H270 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.88■□□□□ 0.61
VPS11Q9H270 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS11Q9H270 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS11Q9H270 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
VPS11Q9H270 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS11Q9H270 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
VPS11Q9H270 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 NBPF21P-201ENST00000425093 1451 ntBASIC18.87■□□□□ 0.61
VPS11Q9H270 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS11Q9H270 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.87■□□□□ 0.61
VPS11Q9H270 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS11Q9H270 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VPS11Q9H270 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS11Q9H270 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 HLA-A-209ENST00000638375 975 ntBASIC18.87■□□□□ 0.61
VPS11Q9H270 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VPS11Q9H270 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS11Q9H270 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VPS11Q9H270 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VPS11Q9H270 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS11Q9H270 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS11Q9H270 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.86■□□□□ 0.61
VPS11Q9H270 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS11Q9H270 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS11Q9H270 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.86■□□□□ 0.61
VPS11Q9H270 TSPY23P-201ENST00000440136 739 ntBASIC18.86■□□□□ 0.61
VPS11Q9H270 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VPS11Q9H270 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
VPS11Q9H270 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS11Q9H270 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.86■□□□□ 0.61
VPS11Q9H270 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS11Q9H270 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VPS11Q9H270 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS11Q9H270 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VPS11Q9H270 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS11Q9H270 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS11Q9H270 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VPS11Q9H270 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS11Q9H270 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
VPS11Q9H270 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS11Q9H270 AC008764.6-201ENST00000595909 2069 ntBASIC18.85■□□□□ 0.61
VPS11Q9H270 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms