Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 AC239809.2-201ENST00000415381 517 ntBASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
POLR2J3Q9H1A7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 HLA-L-209ENST00000420110 1011 ntBASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 POU5F1P3-201ENST00000428824 1078 ntBASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 AC133681.1-201ENST00000465482 601 ntBASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 Z85996.1-201ENST00000494644 937 ntBASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 PRSS44-201ENST00000515154 1146 ntBASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 RNA5SP413-201ENST00000516373 109 ntBASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2J3Q9H1A7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2J3Q9H1A7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.33■□□□□ 0.36
POLR2J3Q9H1A7 HEIH-201ENST00000623091 1652 ntBASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2J3Q9H1A7 KRASP1-201ENST00000407852 552 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms