Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EBF4Q9BQW3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 AL121829.2-201ENST00000620908 328 ntBASIC18.27■□□□□ 0.52
EBF4Q9BQW3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 AC073111.5-205ENST00000641717 521 ntBASIC18.27■□□□□ 0.52
EBF4Q9BQW3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
EBF4Q9BQW3 AC099398.1-201ENST00000567919 2776 ntBASIC18.27■□□□□ 0.51
EBF4Q9BQW3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.27■□□□□ 0.51
EBF4Q9BQW3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
EBF4Q9BQW3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
EBF4Q9BQW3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 AC026271.2-201ENST00000428091 497 ntBASIC18.26■□□□□ 0.51
EBF4Q9BQW3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.26■□□□□ 0.51
EBF4Q9BQW3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 AL160286.2-201ENST00000567150 934 ntBASIC18.26■□□□□ 0.51
EBF4Q9BQW3 AC120498.8-201ENST00000614275 531 ntBASIC18.26■□□□□ 0.51
EBF4Q9BQW3 AC068587.9-201ENST00000641814 219 ntBASIC18.26■□□□□ 0.51
EBF4Q9BQW3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.26■□□□□ 0.51
EBF4Q9BQW3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.26■□□□□ 0.51
EBF4Q9BQW3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 AC106820.2-201ENST00000563775 3264 ntBASIC18.25■□□□□ 0.51
EBF4Q9BQW3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 MIR663A-201ENST00000385250 93 ntBASIC18.25■□□□□ 0.51
EBF4Q9BQW3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 HLA-A-209ENST00000638375 975 ntBASIC18.25■□□□□ 0.51
EBF4Q9BQW3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EBF4Q9BQW3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms