Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.39■□□□□ 0.37
TM9SF2Q99805 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF2Q99805 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF2Q99805 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF2Q99805 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.38■□□□□ 0.37
TM9SF2Q99805 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 AC097493.4-201ENST00000641197 219 ntBASIC17.38■□□□□ 0.37
TM9SF2Q99805 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
TM9SF2Q99805 KRT8P8-201ENST00000434750 1448 ntBASIC17.38■□□□□ 0.37
TM9SF2Q99805 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF2Q99805 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 NOC2LP1-202ENST00000452600 2235 ntBASIC17.37■□□□□ 0.37
TM9SF2Q99805 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 AC006333.2-201ENST00000607957 2099 ntBASIC17.37■□□□□ 0.37
TM9SF2Q99805 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 AP000525.1-201ENST00000608286 694 ntBASIC17.37■□□□□ 0.37
TM9SF2Q99805 MIR6786-201ENST00000616843 113 ntBASIC17.37■□□□□ 0.37
TM9SF2Q99805 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 AC020916.1-201ENST00000587762 1774 ntBASIC17.37■□□□□ 0.37
TM9SF2Q99805 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.37■□□□□ 0.37
TM9SF2Q99805 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 AL390961.4-201ENST00000623958 2535 ntBASIC17.37■□□□□ 0.37
TM9SF2Q99805 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TM9SF2Q99805 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TM9SF2Q99805 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 MIR1238-201ENST00000408483 83 ntBASIC17.36■□□□□ 0.37
TM9SF2Q99805 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.36■□□□□ 0.37
TM9SF2Q99805 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms