Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.71□□□□□ -0.22
MUC4Q99102 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.71□□□□□ -0.22
MUC4Q99102 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MUC4Q99102 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.7□□□□□ -0.22
MUC4Q99102 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
MUC4Q99102 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MUC4Q99102 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.7□□□□□ -0.22
MUC4Q99102 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.7□□□□□ -0.22
MUC4Q99102 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.7□□□□□ -0.22
MUC4Q99102 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MUC4Q99102 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MUC4Q99102 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MUC4Q99102 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.69□□□□□ -0.22
MUC4Q99102 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.69□□□□□ -0.22
MUC4Q99102 TSPY21P-201ENST00000433481 731 ntBASIC13.69□□□□□ -0.22
MUC4Q99102 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 AC110285.5-201ENST00000611501 352 ntBASIC13.69□□□□□ -0.22
MUC4Q99102 AC133561.5-201ENST00000635547 218 ntBASIC13.69□□□□□ -0.22
MUC4Q99102 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.69□□□□□ -0.22
MUC4Q99102 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.69□□□□□ -0.22
MUC4Q99102 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.69□□□□□ -0.22
MUC4Q99102 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.69□□□□□ -0.22
MUC4Q99102 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 NOC2LP1-202ENST00000452600 2235 ntBASIC13.69□□□□□ -0.22
MUC4Q99102 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
MUC4Q99102 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.69□□□□□ -0.22
MUC4Q99102 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 Z85996.1-201ENST00000494644 937 ntBASIC13.69□□□□□ -0.22
MUC4Q99102 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
MUC4Q99102 NUDT16P1-203ENST00000513809 620 ntBASIC13.69□□□□□ -0.22
MUC4Q99102 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.69□□□□□ -0.22
MUC4Q99102 RARRES2P10-201ENST00000564312 460 ntBASIC13.69□□□□□ -0.22
MUC4Q99102 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MUC4Q99102 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
MUC4Q99102 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MUC4Q99102 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
MUC4Q99102 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
MUC4Q99102 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 AL353807.1-201ENST00000427475 662 ntBASIC13.68□□□□□ -0.22
MUC4Q99102 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.68□□□□□ -0.22
MUC4Q99102 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MUC4Q99102 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.68□□□□□ -0.22
MUC4Q99102 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.68□□□□□ -0.22
MUC4Q99102 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
MUC4Q99102 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.68□□□□□ -0.22
MUC4Q99102 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MUC4Q99102 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms