Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.07■□□□□ 0
RITA1Q96K30 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.07■□□□□ 0
RITA1Q96K30 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RITA1Q96K30 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.07■□□□□ 0
RITA1Q96K30 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
RITA1Q96K30 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RITA1Q96K30 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RITA1Q96K30 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.06■□□□□ 0
RITA1Q96K30 GPAT2P1-201ENST00000444924 1672 ntBASIC15.06■□□□□ 0
RITA1Q96K30 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.06■□□□□ 0
RITA1Q96K30 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RITA1Q96K30 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RITA1Q96K30 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.06■□□□□ 0
RITA1Q96K30 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.06■□□□□ 0
RITA1Q96K30 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.06■□□□□ 0
RITA1Q96K30 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.06■□□□□ 0
RITA1Q96K30 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.06■□□□□ 0
RITA1Q96K30 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.06■□□□□ 0
RITA1Q96K30 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 CYP2D8P-201ENST00000433633 1490 ntBASIC15.06■□□□□ 0
RITA1Q96K30 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.06■□□□□ 0
RITA1Q96K30 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.06■□□□□ 0
RITA1Q96K30 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RITA1Q96K30 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.06■□□□□ 0
RITA1Q96K30 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RITA1Q96K30 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.05■□□□□ 0
RITA1Q96K30 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
RITA1Q96K30 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RITA1Q96K30 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RITA1Q96K30 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RITA1Q96K30 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 INGX-201ENST00000359239 846 ntBASIC15.05■□□□□ -0
RITA1Q96K30 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.05■□□□□ -0
RITA1Q96K30 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 AL023284.2-201ENST00000405850 579 ntBASIC15.05■□□□□ -0
RITA1Q96K30 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RITA1Q96K30 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.05■□□□□ -0
RITA1Q96K30 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.05■□□□□ -0
RITA1Q96K30 AL023803.3-201ENST00000615559 522 ntBASIC15.05■□□□□ -0
RITA1Q96K30 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.05■□□□□ -0
RITA1Q96K30 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 AC126763.1-201ENST00000552015 2118 ntBASIC15.05■□□□□ -0
RITA1Q96K30 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.05■□□□□ -0
RITA1Q96K30 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RITA1Q96K30 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RITA1Q96K30 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RITA1Q96K30 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RITA1Q96K30 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.04■□□□□ -0
RITA1Q96K30 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.04■□□□□ -0
RITA1Q96K30 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.04■□□□□ -0
RITA1Q96K30 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RITA1Q96K30 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.04■□□□□ -0
RITA1Q96K30 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.04■□□□□ -0
RITA1Q96K30 MIR4674-201ENST00000582457 87 ntBASIC15.04■□□□□ -0
RITA1Q96K30 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.04■□□□□ -0
RITA1Q96K30 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.04■□□□□ -0
RITA1Q96K30 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.04■□□□□ -0
RITA1Q96K30 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RITA1Q96K30 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.04■□□□□ -0
RITA1Q96K30 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.04■□□□□ -0
RITA1Q96K30 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.04■□□□□ -0
RITA1Q96K30 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RITA1Q96K30 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms