Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NEIL1Q96FI4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.83■□□□□ 0.12
NEIL1Q96FI4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.83■□□□□ 0.12
NEIL1Q96FI4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NEIL1Q96FI4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AC007663.1-201ENST00000438948 1240 ntBASIC15.82■□□□□ 0.12
NEIL1Q96FI4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AL023803.3-201ENST00000615559 522 ntBASIC15.82■□□□□ 0.12
NEIL1Q96FI4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 AC092338.2-201ENST00000568827 1415 ntBASIC15.82■□□□□ 0.12
NEIL1Q96FI4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NEIL1Q96FI4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 AC005521.1-201ENST00000393351 872 ntBASIC15.81■□□□□ 0.12
NEIL1Q96FI4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 NEFHP1-201ENST00000412845 2629 ntBASIC15.81■□□□□ 0.12
NEIL1Q96FI4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.81■□□□□ 0.12
NEIL1Q96FI4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
NEIL1Q96FI4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 INGX-201ENST00000359239 846 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 RCN1P1-201ENST00000400413 996 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 AL512604.3-201ENST00000569583 964 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 FAM87A-204ENST00000613235 858 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 AC092865.7-201ENST00000641832 219 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 AC093484.2-201ENST00000580996 2166 ntBASIC15.8■□□□□ 0.12
NEIL1Q96FI4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.8■□□□□ 0.12
NEIL1Q96FI4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms