Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 KRT8P11-201ENST00000409686 1436 ntBASIC19.72■□□□□ 0.75
RNF25Q96BH1 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 AP002982.1-201ENST00000492365 877 ntBASIC19.72■□□□□ 0.75
RNF25Q96BH1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF25Q96BH1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RNF25Q96BH1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 RPPH1-201ENST00000516869 333 ntBASIC19.71■□□□□ 0.75
RNF25Q96BH1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 ADAM3B-201ENST00000569937 840 ntBASIC19.71■□□□□ 0.75
RNF25Q96BH1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF25Q96BH1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 NOC2LP1-202ENST00000452600 2235 ntBASIC19.71■□□□□ 0.75
RNF25Q96BH1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF25Q96BH1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.7■□□□□ 0.74
RNF25Q96BH1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF25Q96BH1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF25Q96BH1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.69■□□□□ 0.74
RNF25Q96BH1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF25Q96BH1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF25Q96BH1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms