Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 TPSP2-201ENST00000561760 610 ntBASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 AC091304.2-201ENST00000564639 760 ntBASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 AC012615.1-201ENST00000565797 1299 ntBASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNPOQ8N3V7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 SDHAP1-207ENST00000440850 2000 ntBASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNPOQ8N3V7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNPOQ8N3V7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.02■□□□□ 0.63
SYNPOQ8N3V7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SYNPOQ8N3V7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNPOQ8N3V7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
SYNPOQ8N3V7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYNPOQ8N3V7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 AL160237.2-201ENST00000556165 472 ntBASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms