Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 RBM17P1-201ENST00000453646 1190 ntBASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 AC068587.9-201ENST00000641814 219 ntBASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 WIZP1-201ENST00000531444 2299 ntBASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC116Q8IYX3 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 MIR4497-201ENST00000583208 89 ntBASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC116Q8IYX3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 AC104581.1-202ENST00000635932 2618 ntBASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 AC008622.2-201ENST00000617006 1229 ntBASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 AC079598.2-202ENST00000546624 1451 ntBASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 RCC2P3-201ENST00000418112 1537 ntBASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC116Q8IYX3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 AL355075.4-201ENST00000554988 638 ntBASIC17.65■□□□□ 0.42
CCDC116Q8IYX3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms