Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 SDHAP1-207ENST00000440850 2000 ntBASIC17.59■□□□□ 0.41
CCDC71Q8IV32 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC71Q8IV32 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC71Q8IV32 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC71Q8IV32 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 AC067852.2-201ENST00000590513 2313 ntBASIC17.57■□□□□ 0.4
CCDC71Q8IV32 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 AL390955.1-201ENST00000428694 934 ntBASIC17.57■□□□□ 0.4
CCDC71Q8IV32 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC71Q8IV32 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 AL445228.2-201ENST00000605589 952 ntBASIC17.56■□□□□ 0.4
CCDC71Q8IV32 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC71Q8IV32 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC71Q8IV32 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms