Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF550Q7Z398 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF550Q7Z398 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF550Q7Z398 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF550Q7Z398 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 CKBP1-201ENST00000565489 1086 ntBASIC17.28■□□□□ 0.36
ZNF550Q7Z398 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF550Q7Z398 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 AC011506.1-201ENST00000474329 610 ntBASIC17.27■□□□□ 0.36
ZNF550Q7Z398 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF550Q7Z398 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF550Q7Z398 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF550Q7Z398 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF550Q7Z398 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 AC008040.2-201ENST00000461049 708 ntBASIC17.26■□□□□ 0.35
ZNF550Q7Z398 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 AP000692.2-201ENST00000608391 879 ntBASIC17.26■□□□□ 0.35
ZNF550Q7Z398 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 WIZP1-201ENST00000531444 2299 ntBASIC17.26■□□□□ 0.35
ZNF550Q7Z398 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF550Q7Z398 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 KRT8P32-201ENST00000512863 1461 ntBASIC17.25■□□□□ 0.35
ZNF550Q7Z398 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms