Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 AL121829.2-201ENST00000620908 328 ntBASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCHD4Q6ZW05 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 KRT18P16-201ENST00000510337 1294 ntBASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 AC067852.2-201ENST00000590513 2313 ntBASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCHD4Q6ZW05 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 AC090192.1-201ENST00000517740 490 ntBASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 AC073592.3-201ENST00000625118 1834 ntBASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.25■□□□□ 0.35
PTCHD4Q6ZW05 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCHD4Q6ZW05 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms