Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.58■□□□□ 0.4
RTL4Q6ZR62 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 SLC25A1P2-201ENST00000430693 912 ntBASIC17.58■□□□□ 0.4
RTL4Q6ZR62 CCR12P-201ENST00000446203 998 ntBASIC17.58■□□□□ 0.4
RTL4Q6ZR62 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.58■□□□□ 0.4
RTL4Q6ZR62 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 KRT18P21-201ENST00000515767 1272 ntBASIC17.57■□□□□ 0.4
RTL4Q6ZR62 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 AC116562.4-202ENST00000641738 218 ntBASIC17.57■□□□□ 0.4
RTL4Q6ZR62 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.57■□□□□ 0.4
RTL4Q6ZR62 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 AC093503.3-201ENST00000624917 2352 ntBASIC17.56■□□□□ 0.4
RTL4Q6ZR62 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RTL4Q6ZR62 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 KRT8P11-201ENST00000409686 1436 ntBASIC17.55■□□□□ 0.4
RTL4Q6ZR62 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 AC113347.1-201ENST00000413321 391 ntBASIC17.55■□□□□ 0.4
RTL4Q6ZR62 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
RTL4Q6ZR62 SLC25A3P1-201ENST00000443844 931 ntBASIC17.55■□□□□ 0.4
RTL4Q6ZR62 CA15P1-201ENST00000481698 905 ntBASIC17.55■□□□□ 0.4
RTL4Q6ZR62 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTL4Q6ZR62 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms