Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 YBX1P10-201ENST00000444752 975 ntBASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 TSPY20P-201ENST00000450910 630 ntBASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 AC128676.1-201ENST00000454392 318 ntBASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 AC073648.6-201ENST00000641589 218 ntBASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM53Q6P2H8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 KRT18P29-201ENST00000397031 1267 ntBASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 MTDHP1-201ENST00000605323 784 ntBASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 Z82202.1-201ENST00000623446 1880 ntBASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM53Q6P2H8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM53Q6P2H8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.14■□□□□ 0.34
TMEM53Q6P2H8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM53Q6P2H8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM53Q6P2H8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM53Q6P2H8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms