Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.19□□□□□ -0.14
MRPL54Q6P161 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 AL139384.1-201ENST00000612143 3047 ntBASIC14.18□□□□□ -0.14
MRPL54Q6P161 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 AC135776.1-201ENST00000319817 2481 ntBASIC14.18□□□□□ -0.14
MRPL54Q6P161 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MRPL54Q6P161 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MRPL54Q6P161 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 AC027682.1-201ENST00000562846 899 ntBASIC14.17□□□□□ -0.14
MRPL54Q6P161 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
MRPL54Q6P161 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MRPL54Q6P161 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL54Q6P161 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MRPL54Q6P161 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MRPL54Q6P161 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms