Protein–RNA interactions for Protein: Q5EBL8

PDZD11, PDZ domain-containing protein 11, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11Q5EBL8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDZD11Q5EBL8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 BX664725.1-201ENST00000438252 379 ntBASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 TEX21P-204ENST00000641479 1693 ntBASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PDZD11Q5EBL8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 AC103834.1-201ENST00000520383 144 ntBASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDZD11Q5EBL8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.37□□□□□ -0.11
PDZD11Q5EBL8 AC141586.3-201ENST00000562166 1838 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms