Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 KRT8P45-201ENST00000414328 1447 ntBASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 KRT17P2-201ENST00000300992 1314 ntBASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 KRT18P41-201ENST00000518924 1277 ntBASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RSPO1Q2MKA7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 AL353719.1-201ENST00000566847 864 ntBASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
RSPO1Q2MKA7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 AC112777.1-201ENST00000540175 1423 ntBASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 KRT8P9-201ENST00000558927 1449 ntBASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 AC092338.2-201ENST00000568827 1415 ntBASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 MIR1238-201ENST00000408483 83 ntBASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 SLC25A1P2-201ENST00000430693 912 ntBASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 AP003041.3-201ENST00000527151 707 ntBASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO1Q2MKA7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms