Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AF186192.3-201ENST00000583427 947 ntBASIC18.09■□□□□ 0.49
HMGCS1Q01581 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
HMGCS1Q01581 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.09■□□□□ 0.49
HMGCS1Q01581 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCS1Q01581 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCS1Q01581 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCS1Q01581 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCS1Q01581 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCS1Q01581 BICD1-207ENST00000551848 1962 ntBASIC18.08■□□□□ 0.49
HMGCS1Q01581 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCS1Q01581 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCS1Q01581 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCS1Q01581 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
HMGCS1Q01581 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HMGCS1Q01581 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGCS1Q01581 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 AC098590.1-201ENST00000468126 897 ntBASIC18.08■□□□□ 0.48
HMGCS1Q01581 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 AC011298.2-201ENST00000617989 482 ntBASIC18.08■□□□□ 0.48
HMGCS1Q01581 AL359736.2-201ENST00000621992 437 ntBASIC18.08■□□□□ 0.48
HMGCS1Q01581 AC068587.9-201ENST00000641814 219 ntBASIC18.08■□□□□ 0.48
HMGCS1Q01581 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCS1Q01581 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HMGCS1Q01581 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS1Q01581 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCS1Q01581 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 RARRES2P10-201ENST00000564312 460 ntBASIC18.07■□□□□ 0.48
HMGCS1Q01581 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 FAM197Y4-202ENST00000622692 608 ntBASIC18.07■□□□□ 0.48
HMGCS1Q01581 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 AL031985.4-201ENST00000642138 673 ntBASIC18.07■□□□□ 0.48
HMGCS1Q01581 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HMGCS1Q01581 KRT8P32-201ENST00000512863 1461 ntBASIC18.07■□□□□ 0.48
HMGCS1Q01581 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS1Q01581 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 AC011506.1-201ENST00000474329 610 ntBASIC18.06■□□□□ 0.48
HMGCS1Q01581 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 AC142381.4-202ENST00000563973 229 ntBASIC18.06■□□□□ 0.48
HMGCS1Q01581 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 AC073195.1-201ENST00000607241 877 ntBASIC18.06■□□□□ 0.48
HMGCS1Q01581 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCS1Q01581 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS1Q01581 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms