Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEP78395 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PRAMEP78395 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEP78395 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEP78395 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEP78395 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
PRAMEP78395 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 NUDT16P1-203ENST00000513809 620 ntBASIC18.91■□□□□ 0.62
PRAMEP78395 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PRAMEP78395 CKBP1-201ENST00000565489 1086 ntBASIC18.91■□□□□ 0.62
PRAMEP78395 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.91■□□□□ 0.62
PRAMEP78395 AC113410.3-201ENST00000623366 203 ntBASIC18.91■□□□□ 0.62
PRAMEP78395 TMEM191A-211ENST00000637163 1067 ntBASIC18.91■□□□□ 0.62
PRAMEP78395 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PRAMEP78395 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEP78395 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEP78395 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEP78395 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEP78395 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEP78395 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAMEP78395 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.9■□□□□ 0.62
PRAMEP78395 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEP78395 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEP78395 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEP78395 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEP78395 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEP78395 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.9■□□□□ 0.62
PRAMEP78395 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.9■□□□□ 0.62
PRAMEP78395 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEP78395 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEP78395 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEP78395 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PRAMEP78395 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PRAMEP78395 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRAMEP78395 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEP78395 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEP78395 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEP78395 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEP78395 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 MESTP1-201ENST00000404287 994 ntBASIC18.89■□□□□ 0.61
PRAMEP78395 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.89■□□□□ 0.61
PRAMEP78395 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.89■□□□□ 0.61
PRAMEP78395 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRAMEP78395 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.89■□□□□ 0.61
PRAMEP78395 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEP78395 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.89■□□□□ 0.61
PRAMEP78395 AP000692.2-201ENST00000608391 879 ntBASIC18.89■□□□□ 0.61
PRAMEP78395 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEP78395 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEP78395 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEP78395 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRAMEP78395 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAMEP78395 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.88■□□□□ 0.61
PRAMEP78395 MIR718-201ENST00000390190 70 ntBASIC18.88■□□□□ 0.61
PRAMEP78395 AL355355.2-201ENST00000442321 338 ntBASIC18.88■□□□□ 0.61
PRAMEP78395 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAMEP78395 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms