Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01023-201ENST00000606054 436 ntBASIC17.19■□□□□ 0.34
CLDN20P56880 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN20P56880 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN20P56880 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CLDN20P56880 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN20P56880 CROCCP3-202ENST00000420820 1947 ntBASIC17.19■□□□□ 0.34
CLDN20P56880 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN20P56880 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 AC135050.7-201ENST00000624508 2218 ntBASIC17.19■□□□□ 0.34
CLDN20P56880 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN20P56880 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN20P56880 AC018470.1-201ENST00000624790 3129 ntBASIC17.19■□□□□ 0.34
CLDN20P56880 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 AC012306.2-201ENST00000609350 630 ntBASIC17.18■□□□□ 0.34
CLDN20P56880 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 AC097493.4-201ENST00000641197 219 ntBASIC17.18■□□□□ 0.34
CLDN20P56880 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLDN20P56880 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 AC009113.1-201ENST00000570267 2443 ntBASIC17.18■□□□□ 0.34
CLDN20P56880 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN20P56880 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLDN20P56880 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN20P56880 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLDN20P56880 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN20P56880 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLDN20P56880 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN20P56880 LINC01568-207ENST00000641790 1380 ntBASIC17.17■□□□□ 0.34
CLDN20P56880 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLDN20P56880 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN20P56880 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN20P56880 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
CLDN20P56880 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 TSPY21P-201ENST00000433481 731 ntBASIC17.17■□□□□ 0.34
CLDN20P56880 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN20P56880 PRSS44-201ENST00000515154 1146 ntBASIC17.17■□□□□ 0.34
CLDN20P56880 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.17■□□□□ 0.34
CLDN20P56880 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLDN20P56880 C2orf69P3-201ENST00000565542 1120 ntBASIC17.17■□□□□ 0.34
CLDN20P56880 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN20P56880 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN20P56880 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN20P56880 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN20P56880 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN20P56880 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLDN20P56880 AL133373.2-201ENST00000623187 2828 ntBASIC17.16■□□□□ 0.34
CLDN20P56880 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLDN20P56880 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN20P56880 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN20P56880 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDN20P56880 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN20P56880 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms