Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN6P56747 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.99■□□□□ 0.47
CLDN6P56747 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.99■□□□□ 0.47
CLDN6P56747 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.99■□□□□ 0.47
CLDN6P56747 AC074051.2-201ENST00000565115 352 ntBASIC17.99■□□□□ 0.47
CLDN6P56747 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.99■□□□□ 0.47
CLDN6P56747 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN6P56747 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN6P56747 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN6P56747 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN6P56747 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.98■□□□□ 0.47
CLDN6P56747 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN6P56747 AC104819.1-201ENST00000504587 486 ntBASIC17.98■□□□□ 0.47
CLDN6P56747 AC012615.1-201ENST00000565797 1299 ntBASIC17.98■□□□□ 0.47
CLDN6P56747 AC120114.3-201ENST00000611923 658 ntBASIC17.98■□□□□ 0.47
CLDN6P56747 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.98■□□□□ 0.47
CLDN6P56747 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN6P56747 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN6P56747 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN6P56747 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLDN6P56747 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN6P56747 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN6P56747 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN6P56747 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN6P56747 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN6P56747 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN6P56747 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN6P56747 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CLDN6P56747 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN6P56747 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CLDN6P56747 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.97■□□□□ 0.47
CLDN6P56747 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN6P56747 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN6P56747 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN6P56747 AC099336.1-202ENST00000602961 463 ntBASIC17.97■□□□□ 0.47
CLDN6P56747 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN6P56747 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN6P56747 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLDN6P56747 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN6P56747 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN6P56747 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLDN6P56747 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN6P56747 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CLDN6P56747 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN6P56747 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN6P56747 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN6P56747 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN6P56747 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN6P56747 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN6P56747 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN6P56747 AC005332.3-201ENST00000589904 676 ntBASIC17.96■□□□□ 0.47
CLDN6P56747 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN6P56747 LINC01711-201ENST00000598340 967 ntBASIC17.96■□□□□ 0.47
CLDN6P56747 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN6P56747 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN6P56747 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
CLDN6P56747 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN6P56747 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN6P56747 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLDN6P56747 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLDN6P56747 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLDN6P56747 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN6P56747 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN6P56747 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms