Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.66■□□□□ 0.58
NUBP1P53384 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.66■□□□□ 0.58
NUBP1P53384 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.66■□□□□ 0.58
NUBP1P53384 RNA5SP416-201ENST00000516838 111 ntBASIC18.66■□□□□ 0.58
NUBP1P53384 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.66■□□□□ 0.58
NUBP1P53384 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NUBP1P53384 HLA-J-201ENST00000462773 1622 ntBASIC18.66■□□□□ 0.58
NUBP1P53384 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
NUBP1P53384 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUBP1P53384 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
NUBP1P53384 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.65■□□□□ 0.58
NUBP1P53384 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUBP1P53384 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NUBP1P53384 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NUBP1P53384 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.65■□□□□ 0.58
NUBP1P53384 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NUBP1P53384 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NUBP1P53384 AC211486.1-202ENST00000416371 468 ntBASIC18.65■□□□□ 0.58
NUBP1P53384 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC18.65■□□□□ 0.58
NUBP1P53384 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.65■□□□□ 0.58
NUBP1P53384 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC18.65■□□□□ 0.58
NUBP1P53384 AC117500.1-201ENST00000497352 755 ntBASIC18.65■□□□□ 0.58
NUBP1P53384 AC211476.1-201ENST00000503899 468 ntBASIC18.65■□□□□ 0.58
NUBP1P53384 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NUBP1P53384 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.65■□□□□ 0.58
NUBP1P53384 MTDHP3-201ENST00000594186 672 ntBASIC18.65■□□□□ 0.58
NUBP1P53384 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NUBP1P53384 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
NUBP1P53384 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NUBP1P53384 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUBP1P53384 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUBP1P53384 GUSBP5-202ENST00000510805 1989 ntBASIC18.64■□□□□ 0.58
NUBP1P53384 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
NUBP1P53384 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 AL109659.2-201ENST00000606809 1674 ntBASIC18.64■□□□□ 0.57
NUBP1P53384 AC006128.1-201ENST00000624704 1661 ntBASIC18.64■□□□□ 0.57
NUBP1P53384 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 RPS20P25-201ENST00000412447 352 ntBASIC18.64■□□□□ 0.57
NUBP1P53384 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC18.64■□□□□ 0.57
NUBP1P53384 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC18.64■□□□□ 0.57
NUBP1P53384 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.64■□□□□ 0.57
NUBP1P53384 AC096582.2-201ENST00000510860 516 ntBASIC18.64■□□□□ 0.57
NUBP1P53384 SART3-203ENST00000546611 1184 ntBASIC18.64■□□□□ 0.57
NUBP1P53384 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.64■□□□□ 0.57
NUBP1P53384 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.64■□□□□ 0.57
NUBP1P53384 AL355816.2-201ENST00000610049 647 ntBASIC18.64■□□□□ 0.57
NUBP1P53384 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.64■□□□□ 0.57
NUBP1P53384 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NUBP1P53384 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NUBP1P53384 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.64■□□□□ 0.57
NUBP1P53384 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
NUBP1P53384 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NUBP1P53384 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUBP1P53384 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.63■□□□□ 0.57
NUBP1P53384 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.63■□□□□ 0.57
NUBP1P53384 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
NUBP1P53384 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NUBP1P53384 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.63■□□□□ 0.57
NUBP1P53384 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.63■□□□□ 0.57
NUBP1P53384 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.63■□□□□ 0.57
NUBP1P53384 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC18.63■□□□□ 0.57
NUBP1P53384 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
NUBP1P53384 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.63■□□□□ 0.57
NUBP1P53384 AC144521.1-201ENST00000607148 956 ntBASIC18.63■□□□□ 0.57
NUBP1P53384 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.63■□□□□ 0.57
NUBP1P53384 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NUBP1P53384 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUBP1P53384 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms