Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN4P51793 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN4P51793 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN4P51793 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN4P51793 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN4P51793 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCN4P51793 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN4P51793 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 LINC00265-3P-201ENST00000447588 903 ntBASIC19.72■□□□□ 0.75
CLCN4P51793 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN4P51793 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLCN4P51793 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN4P51793 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN4P51793 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.72■□□□□ 0.75
CLCN4P51793 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN4P51793 AFG3L1P-217ENST00000557444 2447 ntBASIC19.72■□□□□ 0.75
CLCN4P51793 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.72■□□□□ 0.75
CLCN4P51793 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLCN4P51793 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CLCN4P51793 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CLCN4P51793 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN4P51793 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLCN4P51793 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN4P51793 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN4P51793 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN4P51793 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN4P51793 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLCN4P51793 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLCN4P51793 Z83836.1-201ENST00000624605 1642 ntBASIC19.71■□□□□ 0.75
CLCN4P51793 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN4P51793 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLCN4P51793 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CLCN4P51793 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CLCN4P51793 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN4P51793 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN4P51793 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN4P51793 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CLCN4P51793 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCN4P51793 PVRIG2P-201ENST00000435460 978 ntBASIC19.7■□□□□ 0.74
CLCN4P51793 EMBP1-201ENST00000458200 901 ntBASIC19.7■□□□□ 0.74
CLCN4P51793 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN4P51793 TOB2P1-201ENST00000469761 992 ntBASIC19.7■□□□□ 0.74
CLCN4P51793 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 AC012615.1-201ENST00000565797 1299 ntBASIC19.7■□□□□ 0.74
CLCN4P51793 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCN4P51793 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLCN4P51793 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN4P51793 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCN4P51793 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCN4P51793 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN4P51793 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN4P51793 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCN4P51793 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN4P51793 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCN4P51793 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN4P51793 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN4P51793 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLCN4P51793 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN4P51793 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN4P51793 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN4P51793 MIR564-202ENST00000385049 94 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms