Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.93■□□□□ 0.46
HLCSP50747 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.93■□□□□ 0.46
HLCSP50747 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HLCSP50747 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.93■□□□□ 0.46
HLCSP50747 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.93■□□□□ 0.46
HLCSP50747 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.93■□□□□ 0.46
HLCSP50747 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLCSP50747 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLCSP50747 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLCSP50747 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.93■□□□□ 0.46
HLCSP50747 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HLCSP50747 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
HLCSP50747 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HLCSP50747 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.92■□□□□ 0.46
HLCSP50747 AC133561.5-201ENST00000635547 218 ntBASIC17.92■□□□□ 0.46
HLCSP50747 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HLCSP50747 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 FSCN1P1-201ENST00000568912 1481 ntBASIC17.92■□□□□ 0.46
HLCSP50747 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HLCSP50747 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLCSP50747 AC093525.10-201ENST00000625130 1569 ntBASIC17.91■□□□□ 0.46
HLCSP50747 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HLCSP50747 AC004980.1-204ENST00000429707 299 ntBASIC17.91■□□□□ 0.46
HLCSP50747 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.91■□□□□ 0.46
HLCSP50747 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.91■□□□□ 0.46
HLCSP50747 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.91■□□□□ 0.46
HLCSP50747 HLA-A-209ENST00000638375 975 ntBASIC17.91■□□□□ 0.46
HLCSP50747 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.91■□□□□ 0.46
HLCSP50747 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.91■□□□□ 0.46
HLCSP50747 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HLCSP50747 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.91■□□□□ 0.46
HLCSP50747 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLCSP50747 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLCSP50747 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.9■□□□□ 0.46
HLCSP50747 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLCSP50747 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLCSP50747 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLCSP50747 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLCSP50747 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
HLCSP50747 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLCSP50747 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms