Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC9A3P48764 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC9A3P48764 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC9A3P48764 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC9A3P48764 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC9A3P48764 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC9A3P48764 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC9A3P48764 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
SLC9A3P48764 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC9A3P48764 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC9A3P48764 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC9A3P48764 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 TSPY23P-201ENST00000440136 739 ntBASIC17.19■□□□□ 0.34
SLC9A3P48764 KRT16P5-201ENST00000455284 522 ntBASIC17.19■□□□□ 0.34
SLC9A3P48764 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SLC9A3P48764 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC9A3P48764 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC9A3P48764 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC9A3P48764 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC9A3P48764 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SLC9A3P48764 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC9A3P48764 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC9A3P48764 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC9A3P48764 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC9A3P48764 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC9A3P48764 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC9A3P48764 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 AC068880.1-201ENST00000507289 2297 ntBASIC17.18■□□□□ 0.34
SLC9A3P48764 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC9A3P48764 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SLC9A3P48764 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC9A3P48764 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC9A3P48764 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC9A3P48764 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SLC9A3P48764 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC9A3P48764 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 ID1-201ENST00000376105 1233 ntBASIC17.17■□□□□ 0.34
SLC9A3P48764 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 AC239809.2-201ENST00000415381 517 ntBASIC17.17■□□□□ 0.34
SLC9A3P48764 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SLC9A3P48764 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC9A3P48764 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC9A3P48764 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC9A3P48764 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms