Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 KRT8P32-201ENST00000512863 1461 ntBASIC17.75■□□□□ 0.43
CDKN2CP42773 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2CP42773 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CDKN2CP42773 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDKN2CP42773 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKN2CP42773 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKN2CP42773 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.74■□□□□ 0.43
CDKN2CP42773 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
CDKN2CP42773 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKN2CP42773 NIFKP9-201ENST00000419265 221 ntBASIC17.74■□□□□ 0.43
CDKN2CP42773 AC133681.1-201ENST00000465482 601 ntBASIC17.74■□□□□ 0.43
CDKN2CP42773 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.74■□□□□ 0.43
CDKN2CP42773 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.74■□□□□ 0.43
CDKN2CP42773 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.74■□□□□ 0.43
CDKN2CP42773 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKN2CP42773 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDKN2CP42773 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKN2CP42773 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.74■□□□□ 0.43
CDKN2CP42773 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 PCDHB18P-201ENST00000524813 2368 ntBASIC17.74■□□□□ 0.43
CDKN2CP42773 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.74■□□□□ 0.43
CDKN2CP42773 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
CDKN2CP42773 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2CP42773 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDKN2CP42773 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKN2CP42773 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKN2CP42773 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKN2CP42773 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDKN2CP42773 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKN2CP42773 RPS2P4-201ENST00000476944 856 ntBASIC17.73■□□□□ 0.43
CDKN2CP42773 RN7SL471P-201ENST00000580476 299 ntBASIC17.73■□□□□ 0.43
CDKN2CP42773 AC110285.5-201ENST00000611501 352 ntBASIC17.73■□□□□ 0.43
CDKN2CP42773 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKN2CP42773 AC131212.4-201ENST00000623606 975 ntBASIC17.73■□□□□ 0.43
CDKN2CP42773 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKN2CP42773 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKN2CP42773 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDKN2CP42773 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKN2CP42773 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2CP42773 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKN2CP42773 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.72■□□□□ 0.43
CDKN2CP42773 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.72■□□□□ 0.43
CDKN2CP42773 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDKN2CP42773 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDKN2CP42773 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
CDKN2CP42773 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.72■□□□□ 0.43
CDKN2CP42773 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.72■□□□□ 0.43
CDKN2CP42773 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDKN2CP42773 AC091390.4-202ENST00000476426 537 ntBASIC17.72■□□□□ 0.43
CDKN2CP42773 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.72■□□□□ 0.43
CDKN2CP42773 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.72■□□□□ 0.43
CDKN2CP42773 AC073648.6-201ENST00000641589 218 ntBASIC17.72■□□□□ 0.43
CDKN2CP42773 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.72■□□□□ 0.43
CDKN2CP42773 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDKN2CP42773 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms