Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PCDHA12-202ENST00000613593 2588 ntBASIC16.82■□□□□ 0.28
SOX6P35712 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 SLC25A6P5-201ENST00000435663 894 ntBASIC16.82■□□□□ 0.28
SOX6P35712 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.82■□□□□ 0.28
SOX6P35712 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.82■□□□□ 0.28
SOX6P35712 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.82■□□□□ 0.28
SOX6P35712 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SOX6P35712 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SOX6P35712 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SOX6P35712 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX6P35712 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SOX6P35712 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SOX6P35712 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SOX6P35712 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.81■□□□□ 0.28
SOX6P35712 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 SLC7A5P1-201ENST00000568957 537 ntBASIC16.81■□□□□ 0.28
SOX6P35712 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 FEM1AP3-201ENST00000403722 1741 ntBASIC16.81■□□□□ 0.28
SOX6P35712 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.81■□□□□ 0.28
SOX6P35712 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.81■□□□□ 0.28
SOX6P35712 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX6P35712 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 TNRC18P3-201ENST00000441896 2691 ntBASIC16.81■□□□□ 0.28
SOX6P35712 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX6P35712 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SOX6P35712 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SOX6P35712 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.8■□□□□ 0.28
SOX6P35712 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.8■□□□□ 0.28
SOX6P35712 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.8■□□□□ 0.28
SOX6P35712 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.8■□□□□ 0.28
SOX6P35712 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.8■□□□□ 0.28
SOX6P35712 NTF6G-201ENST00000591094 616 ntBASIC16.8■□□□□ 0.28
SOX6P35712 AC104187.1-201ENST00000607510 612 ntBASIC16.8■□□□□ 0.28
SOX6P35712 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.8■□□□□ 0.28
SOX6P35712 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SOX6P35712 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SOX6P35712 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.8■□□□□ 0.28
SOX6P35712 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SOX6P35712 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.8■□□□□ 0.28
SOX6P35712 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SOX6P35712 AC084018.2-201ENST00000613093 2607 ntBASIC16.8■□□□□ 0.28
SOX6P35712 AC018553.1-201ENST00000616682 1458 ntBASIC16.8■□□□□ 0.28
SOX6P35712 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.79■□□□□ 0.28
SOX6P35712 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SOX6P35712 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SOX6P35712 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms