Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CKS2P33552 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CKS2P33552 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CKS2P33552 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CKS2P33552 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CKS2P33552 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CKS2P33552 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 AC134043.2-201ENST00000624206 2238 ntBASIC13.81□□□□□ -0.2
CKS2P33552 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.81□□□□□ -0.2
CKS2P33552 KRT19P1-201ENST00000405746 1186 ntBASIC13.81□□□□□ -0.2
CKS2P33552 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.81□□□□□ -0.2
CKS2P33552 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.81□□□□□ -0.2
CKS2P33552 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CKS2P33552 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.81□□□□□ -0.2
CKS2P33552 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CKS2P33552 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 LINC00896-202ENST00000609602 2128 ntBASIC13.81□□□□□ -0.2
CKS2P33552 AC004854.2-201ENST00000608450 1441 ntBASIC13.81□□□□□ -0.2
CKS2P33552 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CKS2P33552 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.81□□□□□ -0.2
CKS2P33552 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CKS2P33552 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
CKS2P33552 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 TFP1-202ENST00000475455 1573 ntBASIC13.8□□□□□ -0.2
CKS2P33552 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CKS2P33552 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.8□□□□□ -0.2
CKS2P33552 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.8□□□□□ -0.2
CKS2P33552 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.8□□□□□ -0.2
CKS2P33552 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.8□□□□□ -0.2
CKS2P33552 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.8□□□□□ -0.2
CKS2P33552 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.8□□□□□ -0.2
CKS2P33552 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.8□□□□□ -0.2
CKS2P33552 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
CKS2P33552 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CKS2P33552 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CKS2P33552 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CKS2P33552 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CKS2P33552 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 SIRPAP1-201ENST00000448467 1770 ntBASIC13.79□□□□□ -0.2
CKS2P33552 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 AC010536.3-201ENST00000620306 533 ntBASIC13.79□□□□□ -0.2
CKS2P33552 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.79□□□□□ -0.2
CKS2P33552 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.79□□□□□ -0.2
CKS2P33552 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CKS2P33552 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms