Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.66■□□□□ 0.26
CTLA4P16410 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.66■□□□□ 0.26
CTLA4P16410 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.66■□□□□ 0.26
CTLA4P16410 AP000692.2-201ENST00000608391 879 ntBASIC16.66■□□□□ 0.26
CTLA4P16410 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.66■□□□□ 0.26
CTLA4P16410 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.66■□□□□ 0.26
CTLA4P16410 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
CTLA4P16410 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTLA4P16410 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTLA4P16410 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CTLA4P16410 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTLA4P16410 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CTLA4P16410 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTLA4P16410 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.66■□□□□ 0.26
CTLA4P16410 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTLA4P16410 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTLA4P16410 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CTLA4P16410 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
CTLA4P16410 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 UBE2SP1-201ENST00000450587 669 ntBASIC16.65■□□□□ 0.26
CTLA4P16410 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.65■□□□□ 0.26
CTLA4P16410 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.65■□□□□ 0.26
CTLA4P16410 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 AC073592.3-201ENST00000625118 1834 ntBASIC16.65■□□□□ 0.26
CTLA4P16410 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.65■□□□□ 0.26
CTLA4P16410 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTLA4P16410 RCC2P3-201ENST00000418112 1537 ntBASIC16.65■□□□□ 0.26
CTLA4P16410 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CTLA4P16410 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.64■□□□□ 0.25
CTLA4P16410 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTLA4P16410 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CTLA4P16410 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CTLA4P16410 RPS2P55-201ENST00000397318 883 ntBASIC16.64■□□□□ 0.25
CTLA4P16410 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.64■□□□□ 0.25
CTLA4P16410 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 AC107956.1-201ENST00000494359 873 ntBASIC16.64■□□□□ 0.25
CTLA4P16410 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.64■□□□□ 0.25
CTLA4P16410 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.64■□□□□ 0.25
CTLA4P16410 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.64■□□□□ 0.25
CTLA4P16410 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.64■□□□□ 0.25
CTLA4P16410 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTLA4P16410 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CTLA4P16410 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTLA4P16410 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.64■□□□□ 0.25
CTLA4P16410 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 BICD1-207ENST00000551848 1962 ntBASIC16.64■□□□□ 0.25
CTLA4P16410 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTLA4P16410 AL357033.4-201ENST00000617703 1807 ntBASIC16.63■□□□□ 0.25
CTLA4P16410 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.63■□□□□ 0.25
CTLA4P16410 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 ABHD17AP1-201ENST00000358206 933 ntBASIC16.63■□□□□ 0.25
CTLA4P16410 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CTLA4P16410 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTLA4P16410 NUDT16P1-203ENST00000513809 620 ntBASIC16.63■□□□□ 0.25
CTLA4P16410 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.63■□□□□ 0.25
CTLA4P16410 AC113410.3-201ENST00000623366 203 ntBASIC16.63■□□□□ 0.25
CTLA4P16410 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.63■□□□□ 0.25
CTLA4P16410 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTLA4P16410 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTLA4P16410 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.63■□□□□ 0.25
CTLA4P16410 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms