Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 REXO1L10P-201ENST00000615707 1290 ntBASIC17.35■□□□□ 0.37
UBL4AP11441 REXO1L12P-201ENST00000622156 912 ntBASIC17.35■□□□□ 0.37
UBL4AP11441 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.35■□□□□ 0.37
UBL4AP11441 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.35■□□□□ 0.37
UBL4AP11441 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.35■□□□□ 0.37
UBL4AP11441 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBL4AP11441 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBL4AP11441 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBL4AP11441 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UBL4AP11441 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
UBL4AP11441 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
UBL4AP11441 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.34■□□□□ 0.37
UBL4AP11441 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
UBL4AP11441 SLC25A1P4-201ENST00000567977 778 ntBASIC17.34■□□□□ 0.37
UBL4AP11441 MIR4785-201ENST00000585005 73 ntBASIC17.34■□□□□ 0.37
UBL4AP11441 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.34■□□□□ 0.37
UBL4AP11441 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
UBL4AP11441 AC083906.6-201ENST00000641366 219 ntBASIC17.34■□□□□ 0.37
UBL4AP11441 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.34■□□□□ 0.37
UBL4AP11441 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.34■□□□□ 0.37
UBL4AP11441 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBL4AP11441 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.33■□□□□ 0.37
UBL4AP11441 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
UBL4AP11441 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
UBL4AP11441 AC093503.3-201ENST00000624917 2352 ntBASIC17.33■□□□□ 0.37
UBL4AP11441 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
UBL4AP11441 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
UBL4AP11441 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.33■□□□□ 0.37
UBL4AP11441 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.33■□□□□ 0.37
UBL4AP11441 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBL4AP11441 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBL4AP11441 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
UBL4AP11441 TSPY7P-201ENST00000431358 1114 ntBASIC17.33■□□□□ 0.36
UBL4AP11441 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.33■□□□□ 0.36
UBL4AP11441 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.33■□□□□ 0.36
UBL4AP11441 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.33■□□□□ 0.36
UBL4AP11441 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.33■□□□□ 0.36
UBL4AP11441 AP003071.4-201ENST00000562276 1284 ntBASIC17.33■□□□□ 0.36
UBL4AP11441 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.33■□□□□ 0.36
UBL4AP11441 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
UBL4AP11441 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.33■□□□□ 0.36
UBL4AP11441 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBL4AP11441 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
UBL4AP11441 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBL4AP11441 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 AC096733.2-201ENST00000609937 1394 ntBASIC17.32■□□□□ 0.36
UBL4AP11441 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBL4AP11441 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 CROCCP3-202ENST00000420820 1947 ntBASIC17.32■□□□□ 0.36
UBL4AP11441 MFAP1P1-201ENST00000442257 1255 ntBASIC17.32■□□□□ 0.36
UBL4AP11441 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL4AP11441 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.32■□□□□ 0.36
UBL4AP11441 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.32■□□□□ 0.36
UBL4AP11441 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL4AP11441 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL4AP11441 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.32■□□□□ 0.36
UBL4AP11441 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBL4AP11441 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms