Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 LTB4R2-202ENST00000528054 3092 ntBASIC16.08■□□□□ 0.16
VSIG8P0DPA2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 NBPF21P-201ENST00000425093 1451 ntBASIC16.08■□□□□ 0.16
VSIG8P0DPA2 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.08■□□□□ 0.16
VSIG8P0DPA2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VSIG8P0DPA2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 POM121L13P-201ENST00000422362 380 ntBASIC16.07■□□□□ 0.16
VSIG8P0DPA2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 AC068587.9-201ENST00000641814 219 ntBASIC16.07■□□□□ 0.16
VSIG8P0DPA2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VSIG8P0DPA2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AC090340.1-201ENST00000620778 4980 ntBASIC16.06■□□□□ 0.16
VSIG8P0DPA2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AC008764.6-201ENST00000595909 2069 ntBASIC16.06■□□□□ 0.16
VSIG8P0DPA2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VSIG8P0DPA2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.05■□□□□ 0.16
VSIG8P0DPA2 AC004264.1-201ENST00000608354 794 ntBASIC16.05■□□□□ 0.16
VSIG8P0DPA2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms