Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HTR1AP08908 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 KRT17P1-201ENST00000399211 1546 ntBASIC17.13■□□□□ 0.33
HTR1AP08908 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
HTR1AP08908 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1AP08908 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HTR1AP08908 KRT18P5-201ENST00000436075 1291 ntBASIC17.13■□□□□ 0.33
HTR1AP08908 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1AP08908 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.13■□□□□ 0.33
HTR1AP08908 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 AC087623.3-201ENST00000607047 1098 ntBASIC17.13■□□□□ 0.33
HTR1AP08908 MIR6821-201ENST00000617625 74 ntBASIC17.13■□□□□ 0.33
HTR1AP08908 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1AP08908 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1AP08908 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1AP08908 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HTR1AP08908 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HTR1AP08908 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1AP08908 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1AP08908 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1AP08908 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HTR1AP08908 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1AP08908 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.12■□□□□ 0.33
HTR1AP08908 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1AP08908 SLC25A6P5-201ENST00000435663 894 ntBASIC17.12■□□□□ 0.33
HTR1AP08908 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1AP08908 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1AP08908 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.12■□□□□ 0.33
HTR1AP08908 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1AP08908 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HTR1AP08908 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
HTR1AP08908 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HTR1AP08908 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HTR1AP08908 AL499627.1-201ENST00000569373 2188 ntBASIC17.12■□□□□ 0.33
HTR1AP08908 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HTR1AP08908 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HTR1AP08908 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1AP08908 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1AP08908 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1AP08908 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1AP08908 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.11■□□□□ 0.33
HTR1AP08908 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 BID-214ENST00000617586 542 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1AP08908 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HTR1AP08908 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1AP08908 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1AP08908 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1AP08908 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1AP08908 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1AP08908 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1AP08908 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1AP08908 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HTR1AP08908 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1AP08908 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.1■□□□□ 0.33
HTR1AP08908 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1AP08908 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1AP08908 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1AP08908 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms